Transcript: ENSMUST00000242559.1 Gm59143-206

Description

predicted gene, 59143 [Source:MGI Symbol;Acc:MGI:7801359]

Location

Chromosome 19: 5,560,800-5,600,402 forward strand.

About this transcript

This transcript has 4 exons, is associated with 2793 variant alleles and maps to 70 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000121780.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000310656.1	Gm59143-207	1009	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000242559.1	Gm59143-206	3027	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241341.2	Gm59143-203	2772	No protein	-	lncRNA	-
ENSMUST00000210638.3	Gm59143-201	2158	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000241535.2	Gm59143-204	1375	No protein	-	lncRNA	-
ENSMUST00000241788.2	Gm59143-205	1358	No protein	-	lncRNA	-
ENSMUST00000310657.1	Gm59143-208	1293	No protein	-	lncRNA	-
ENSMUST00000310658.1	Gm59143-209	1274	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000310660.1	Gm59143-211	1272	No protein	-	lncRNA	-
ENSMUST00000310661.1	Gm59143-212	1198	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000310659.1	Gm59143-210	1189	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000310667.1	Gm59143-218	1161	No protein	-	lncRNA	-
ENSMUST00000310669.1	Gm59143-220	1047	No protein	-	lncRNA	-
ENSMUST00000310668.1	Gm59143-219	1046	No protein	-	lncRNA	-
ENSMUST00000310662.1	Gm59143-213	1008	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000310670.1	Gm59143-221	928	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000310665.1	Gm59143-216	905	No protein	-	lncRNA	-
ENSMUST00000310664.1	Gm59143-215	903	No protein	-	lncRNA	-
ENSMUST00000310663.1	Gm59143-214	846	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000310666.1	Gm59143-217	827	No protein	-	lncRNA	-
ENSMUST00000211026.2	Gm59143-202	300	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 3,027 bps,

Version

ENSMUST00000242559.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENSMUST00000242559.1 Gm59143-206

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Transcript: ENSMUST00000242559.1 Gm59143-206

Summary

About Us

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