Transcript: ENSMUST00000238518.2 Slc35f3-203

Description

solute carrier family 35, member F3 [Source:MGI Symbol;Acc:MGI:2444426]

Gene Synonyms

B230375D17Rik

Location

Chromosome 8: 126,865,734-127,122,717 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 44 domains and features, is associated with 15318 variant alleles and maps to 169 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000057060.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000108759.3	Slc35f3-201	2309	421aa	ENSMUSP00000104390.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40520	Q1LZI2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000238518.2	Slc35f3-203	2912	490aa	ENSMUSP00000158727.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A571BEK8	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000238386.2	Slc35f3-202	2531	327aa	ENSMUSP00000158619.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A571BFY6	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,912 bps, Translation length: 490 residues

Version

ENSMUST00000238518.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000238518.2 Slc35f3-203

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Transcript: ENSMUST00000238518.2 Slc35f3-203

Summary

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