Transcript: ENSMUST00000237678.2 Gm47071-202

Description

predicted gene, 47071 [Source:MGI Symbol;Acc:MGI:6095789]

Location

Chromosome 13: 55,974,063-56,232,651 forward strand.

About this transcript

This transcript has 6 exons, is associated with 12760 variant alleles and maps to 49 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000114493.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000377043.1	Gm47071-207	691	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000237678.2	Gm47071-202	2677	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000225993.2	Gm47071-201	2492	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000242690.1	Gm47071-205	2491	No protein	-	lncRNA	-
ENSMUST00000377104.1	Gm47071-268	1530	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377068.1	Gm47071-232	1487	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377149.1	Gm47071-313	1470	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377111.1	Gm47071-275	1399	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377109.1	Gm47071-273	1397	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377115.1	Gm47071-279	1375	No protein	-	lncRNA	-
ENSMUST00000377103.1	Gm47071-267	1362	No protein	-	lncRNA	-
ENSMUST00000377102.1	Gm47071-266	1294	No protein	-	lncRNA	-
ENSMUST00000377105.1	Gm47071-269	1267	No protein	-	lncRNA	-
ENSMUST00000377117.1	Gm47071-281	1264	No protein	-	lncRNA	-
ENSMUST00000377110.1	Gm47071-274	1239	No protein	-	lncRNA	-
ENSMUST00000377119.1	Gm47071-283	1238	No protein	-	lncRNA	-
ENSMUST00000377069.1	Gm47071-233	1223	No protein	-	lncRNA	-
ENSMUST00000377112.1	Gm47071-276	1216	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377152.1	Gm47071-316	1188	No protein	-	lncRNA	-
ENSMUST00000377121.1	Gm47071-285	1171	No protein	-	lncRNA	-
ENSMUST00000377150.1	Gm47071-314	1168	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377097.1	Gm47071-261	1116	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377140.1	Gm47071-304	1076	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377082.1	Gm47071-246	1067	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377060.1	Gm47071-224	1053	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377153.1	Gm47071-317	1038	No protein	-	lncRNA	-
ENSMUST00000377162.1	Gm47071-326	962	No protein	-	lncRNA	-
ENSMUST00000377100.1	Gm47071-264	904	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377072.1	Gm47071-236	899	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377142.1	Gm47071-306	873	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377116.1	Gm47071-280	861	No protein	-	lncRNA	-
ENSMUST00000377127.1	Gm47071-291	861	No protein	-	lncRNA	-
ENSMUST00000377052.1	Gm47071-216	845	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377094.1	Gm47071-258	844	No protein	-	lncRNA	-
ENSMUST00000377090.1	Gm47071-254	824	No protein	-	lncRNA	-
ENSMUST00000377137.1	Gm47071-301	821	No protein	-	lncRNA	-
ENSMUST00000377143.1	Gm47071-307	819	No protein	-	lncRNA	-
ENSMUST00000377055.1	Gm47071-219	817	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377044.1	Gm47071-208	814	No protein	-	lncRNA	-
ENSMUST00000377125.1	Gm47071-289	812	No protein	-	lncRNA	-
ENSMUST00000377092.1	Gm47071-256	812	No protein	-	lncRNA	-
ENSMUST00000242203.2	Gm47071-204	790	No protein	-	lncRNA	-
ENSMUST00000377084.1	Gm47071-248	779	No protein	-	lncRNA	-
ENSMUST00000242857.2	Gm47071-206	771	No protein	-	lncRNA	-
ENSMUST00000377053.1	Gm47071-217	770	No protein	-	lncRNA	-
ENSMUST00000377076.1	Gm47071-240	770	No protein	-	lncRNA	-
ENSMUST00000377078.1	Gm47071-242	770	No protein	-	lncRNA	-
ENSMUST00000377062.1	Gm47071-226	766	No protein	-	lncRNA	-
ENSMUST00000377099.1	Gm47071-263	761	No protein	-	lncRNA	-
ENSMUST00000377079.1	Gm47071-243	759	No protein	-	lncRNA	-
ENSMUST00000241726.2	Gm47071-203	753	No protein	-	lncRNA	-
ENSMUST00000377118.1	Gm47071-282	751	No protein	-	lncRNA	-
ENSMUST00000377058.1	Gm47071-222	743	No protein	-	lncRNA	-
ENSMUST00000377073.1	Gm47071-237	732	No protein	-	lncRNA	-
ENSMUST00000377122.1	Gm47071-286	732	No protein	-	lncRNA	-
ENSMUST00000377098.1	Gm47071-262	729	No protein	-	lncRNA	-
ENSMUST00000377145.1	Gm47071-309	729	No protein	-	lncRNA	-
ENSMUST00000377161.1	Gm47071-325	728	No protein	-	lncRNA	-
ENSMUST00000377050.1	Gm47071-214	724	No protein	-	lncRNA	-
ENSMUST00000377054.1	Gm47071-218	723	No protein	-	lncRNA	-
ENSMUST00000377091.1	Gm47071-255	722	No protein	-	lncRNA	-
ENSMUST00000377049.1	Gm47071-213	712	No protein	-	lncRNA	-
ENSMUST00000377064.1	Gm47071-228	712	No protein	-	lncRNA	-
ENSMUST00000377138.1	Gm47071-302	709	No protein	-	lncRNA	-
ENSMUST00000377046.1	Gm47071-210	708	No protein	-	lncRNA	-
ENSMUST00000377081.1	Gm47071-245	705	No protein	-	lncRNA	-
ENSMUST00000377070.1	Gm47071-234	703	No protein	-	lncRNA	-
ENSMUST00000377095.1	Gm47071-259	701	No protein	-	lncRNA	-
ENSMUST00000377047.1	Gm47071-211	691	No protein	-	lncRNA	-
ENSMUST00000377101.1	Gm47071-265	678	No protein	-	lncRNA	-
ENSMUST00000377088.1	Gm47071-252	664	No protein	-	lncRNA	-
ENSMUST00000377158.1	Gm47071-322	659	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377123.1	Gm47071-287	657	No protein	-	lncRNA	-
ENSMUST00000377107.1	Gm47071-271	653	No protein	-	lncRNA	-
ENSMUST00000377059.1	Gm47071-223	651	No protein	-	lncRNA	-
ENSMUST00000377056.1	Gm47071-220	650	No protein	-	lncRNA	-
ENSMUST00000377124.1	Gm47071-288	648	No protein	-	lncRNA	-
ENSMUST00000377136.1	Gm47071-300	648	No protein	-	lncRNA	-
ENSMUST00000377114.1	Gm47071-278	646	No protein	-	lncRNA	-
ENSMUST00000377089.1	Gm47071-253	644	No protein	-	lncRNA	-
ENSMUST00000377065.1	Gm47071-229	643	No protein	-	lncRNA	-
ENSMUST00000377129.1	Gm47071-293	640	No protein	-	lncRNA	-
ENSMUST00000377061.1	Gm47071-225	636	No protein	-	lncRNA	-
ENSMUST00000377077.1	Gm47071-241	632	No protein	-	lncRNA	-
ENSMUST00000377045.1	Gm47071-209	630	No protein	-	lncRNA	-
ENSMUST00000377087.1	Gm47071-251	628	No protein	-	lncRNA	-
ENSMUST00000377075.1	Gm47071-239	624	No protein	-	lncRNA	-
ENSMUST00000377080.1	Gm47071-244	619	No protein	-	lncRNA	-
ENSMUST00000377130.1	Gm47071-294	614	No protein	-	lncRNA	-
ENSMUST00000377108.1	Gm47071-272	607	No protein	-	lncRNA	-
ENSMUST00000377085.1	Gm47071-249	605	No protein	-	lncRNA	-
ENSMUST00000377106.1	Gm47071-270	605	No protein	-	lncRNA	-
ENSMUST00000377147.1	Gm47071-311	605	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377067.1	Gm47071-231	597	No protein	-	lncRNA	-
ENSMUST00000377113.1	Gm47071-277	596	No protein	-	lncRNA	-
ENSMUST00000377071.1	Gm47071-235	591	No protein	-	lncRNA	-
ENSMUST00000377154.1	Gm47071-318	585	No protein	-	lncRNA	-
ENSMUST00000377074.1	Gm47071-238	584	No protein	-	lncRNA	-
ENSMUST00000377139.1	Gm47071-303	583	No protein	-	lncRNA	-
ENSMUST00000377096.1	Gm47071-260	582	No protein	-	lncRNA	-
ENSMUST00000377083.1	Gm47071-247	579	No protein	-	lncRNA	-
ENSMUST00000377066.1	Gm47071-230	578	No protein	-	lncRNA	-
ENSMUST00000377051.1	Gm47071-215	575	No protein	-	lncRNA	-
ENSMUST00000377048.1	Gm47071-212	574	No protein	-	lncRNA	-
ENSMUST00000377086.1	Gm47071-250	553	No protein	-	lncRNA	-
ENSMUST00000377126.1	Gm47071-290	552	No protein	-	lncRNA	-
ENSMUST00000377141.1	Gm47071-305	547	No protein	-	lncRNA	-
ENSMUST00000377093.1	Gm47071-257	543	No protein	-	lncRNA	-
ENSMUST00000377057.1	Gm47071-221	533	No protein	-	lncRNA	-
ENSMUST00000377128.1	Gm47071-292	530	No protein	-	lncRNA	-
ENSMUST00000377134.1	Gm47071-298	524	No protein	-	lncRNA	-
ENSMUST00000377135.1	Gm47071-299	502	No protein	-	lncRNA	-
ENSMUST00000377132.1	Gm47071-296	498	No protein	-	lncRNA	-
ENSMUST00000377156.1	Gm47071-320	495	No protein	-	lncRNA	-
ENSMUST00000377063.1	Gm47071-227	492	No protein	-	lncRNA	-
ENSMUST00000377146.1	Gm47071-310	487	No protein	-	lncRNA	-
ENSMUST00000377148.1	Gm47071-312	481	No protein	-	lncRNA	-
ENSMUST00000377144.1	Gm47071-308	474	No protein	-	lncRNA	-
ENSMUST00000377160.1	Gm47071-324	469	No protein	-	lncRNA	-
ENSMUST00000377131.1	Gm47071-295	467	No protein	-	lncRNA	-
ENSMUST00000377133.1	Gm47071-297	459	No protein	-	lncRNA	-
ENSMUST00000377151.1	Gm47071-315	438	No protein	-	lncRNA	-
ENSMUST00000377155.1	Gm47071-319	433	No protein	-	lncRNA	-
ENSMUST00000377120.1	Gm47071-284	421	No protein	-	lncRNA	-
ENSMUST00000377157.1	Gm47071-321	404	No protein	-	lncRNA	-
ENSMUST00000377159.1	Gm47071-323	375	No protein	-	lncRNA	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 2,677 bps,

Version

ENSMUST00000237678.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000237678.2 Gm47071-202

Summary

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Transcript: ENSMUST00000237678.2 Gm47071-202

Summary

About Us

Get help

Our sister sites

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