Transcript: ENSMUST00000236277.2 4930588A03Rik-202

Description

RIKEN cDNA 4930588A03 gene [Source:MGI Symbol;Acc:MGI:1923118]

Location

Chromosome 18: 43,171,616-43,304,339 reverse strand.

About this transcript

This transcript has 10 exons, is associated with 7478 variant alleles and maps to 70 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000117792.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000235443.3	4930588A03Rik-201	970	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSMUST00000236720.2	4930588A03Rik-203	902	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000236277.2	4930588A03Rik-202	1389	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000317517.1	4930588A03Rik-212	1373	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000317523.1	4930588A03Rik-218	1075	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000317525.1	4930588A03Rik-220	1023	No protein	-	lncRNA	-
ENSMUST00000317522.1	4930588A03Rik-217	980	No protein	-	lncRNA	-
ENSMUST00000317521.1	4930588A03Rik-216	815	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000237395.3	4930588A03Rik-204	801	No protein	-	lncRNA	-
ENSMUST00000317524.1	4930588A03Rik-219	782	No protein	-	lncRNA	-
ENSMUST00000317526.1	4930588A03Rik-221	779	No protein	-	lncRNA	-
ENSMUST00000237566.3	4930588A03Rik-205	754	No protein	-	lncRNA	-
ENSMUST00000317519.1	4930588A03Rik-214	753	No protein	-	lncRNA	-
ENSMUST00000317520.1	4930588A03Rik-215	691	No protein	-	lncRNA	-
ENSMUST00000265816.1	4930588A03Rik-206	616	No protein	-	lncRNA	-
ENSMUST00000317514.1	4930588A03Rik-209	603	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000317515.1	4930588A03Rik-210	474	No protein	-	lncRNA	-
ENSMUST00000317516.1	4930588A03Rik-211	452	No protein	-	lncRNA	-
ENSMUST00000265818.1	4930588A03Rik-207	440	No protein	-	lncRNA	-
ENSMUST00000265819.1	4930588A03Rik-208	389	No protein	-	lncRNA	-
ENSMUST00000317518.1	4930588A03Rik-213	373	No protein	-	lncRNA	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 1,389 bps,

Version

ENSMUST00000236277.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000236277.2 4930588A03Rik-202

Summary

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Transcript: ENSMUST00000236277.2 4930588A03Rik-202

Summary

About Us

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