Transcript: ENSMUST00000236234.2 Haus1-202

Description

HAUS augmin-like complex, subunit 1 [Source:MGI Symbol;Acc:MGI:2385076]

Gene Synonyms

Ccdc5, HEI-C, spindle associated

Location

Chromosome 18: 77,845,267-77,861,586 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 12 domains and features, is associated with 1622 variant alleles and maps to 170 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000041840.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000048192.9	Haus1-201	1003	278aa	ENSMUSP00000035826.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29357	Q8BHX1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000236234.2	Haus1-202	1226	293aa	ENSMUSP00000158336.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BB26	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000236575.2	Haus1-203	6882	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,226 bps, Translation length: 293 residues

Version

ENSMUST00000236234.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000236234.2 Haus1-202

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Transcript: ENSMUST00000236234.2 Haus1-202

Summary

About Us

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