Transcript: ENSMUST00000232360.2 Gm49688-201

Description

predicted gene, 49688 [Source:MGI Symbol;Acc:MGI:6215139]

Location

Chromosome 16: 88,405,558-88,435,102 forward strand.

About this transcript

This transcript has 3 exons, is associated with 2441 variant alleles and maps to 5 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000116616.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000297615.1	Gm49688-213	745	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000232360.2	Gm49688-201	1364	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000297604.1	Gm49688-203	997	No protein	-	lncRNA	-
ENSMUST00000297603.1	Gm49688-202	949	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000297609.1	Gm49688-208	861	No protein	-	lncRNA	-
ENSMUST00000297606.1	Gm49688-205	852	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000297605.1	Gm49688-204	820	No protein	-	lncRNA	-
ENSMUST00000297610.1	Gm49688-209	773	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000297613.1	Gm49688-212	763	No protein	-	lncRNA	-
ENSMUST00000297608.1	Gm49688-207	703	No protein	-	lncRNA	-
ENSMUST00000297607.1	Gm49688-206	636	No protein	-	lncRNA	-
ENSMUST00000297611.1	Gm49688-210	592	No protein	-	lncRNA	-
ENSMUST00000297612.1	Gm49688-211	382	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,364 bps,

Version

ENSMUST00000232360.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000232360.2 Gm49688-201

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Transcript: ENSMUST00000232360.2 Gm49688-201

Summary

About Us

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