Transcript: ENSMUST00000224495.2 Gm49395-201

Description

predicted gene, 49395 [Source:MGI Symbol;Acc:MGI:6121627]

Location

Chromosome 13: 115,171,809-115,238,160 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 4562 variant alleles and maps to 92 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000114470.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMUST00000224997.2	Gm49395-202	1057	57aa	ENSMUSP00000153073.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YCN5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000224495.2	Gm49395-201	645	57aa	ENSMUSP00000152908.2	Nonsense mediated decay	A0A286YCN5	-
ENSMUST00000225486.2	Gm49395-204	535	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-
ENSMUST00000225093.2	Gm49395-203	501	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 645 bps, Translation length: 57 residues

Version

ENSMUST00000224495.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000224495.2 Gm49395-201

Summary

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Transcript: ENSMUST00000224495.2 Gm49395-201

Summary

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