Transcript: ENSMUST00000214237.2 Gm29825-201

Description

predicted gene, 29825 [Source:MGI Symbol;Acc:MGI:5588984]

Location

Chromosome 9: 113,947,156-114,021,708 forward strand.

About this transcript

This transcript has 26 exons, is associated with 4361 variant alleles and maps to 134 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000111734.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000304903.1	Gm29825-202	1988	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000214237.2	Gm29825-201	3775	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000304905.1	Gm29825-204	1985	No protein	-	lncRNA	-
ENSMUST00000304904.1	Gm29825-203	1874	No protein	-	lncRNA	-
ENSMUST00000304906.1	Gm29825-205	860	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000304907.1	Gm29825-206	807	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000304912.1	Gm29825-211	729	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000304909.1	Gm29825-208	678	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000304908.1	Gm29825-207	621	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000304910.1	Gm29825-209	362	No protein	-	lncRNA	-
ENSMUST00000304911.1	Gm29825-210	286	No protein	-	lncRNA	-

Summary

Statistics

Exons: 26, Coding exons: 0, Transcript length: 3,775 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000214237.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not best-in-genome evidence [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENSMUST00000214237.2 Gm29825-201

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Transcript: ENSMUST00000214237.2 Gm29825-201

Summary

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