Transcript: ENSMUST00000212780.2 Gm35256-201

Description

predicted gene, 35256 [Source:MGI Symbol;Acc:MGI:5594415]

Location

Chromosome 8: 71,479,436-71,579,220 forward strand.

About this transcript

This transcript has 15 exons, is associated with 5221 variant alleles and maps to 319 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000110554.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000307349.1	Gm35256-203	2032	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000212780.2	Gm35256-201	3269	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000307350.1	Gm35256-204	2169	No protein	-	lncRNA	-
ENSMUST00000245061.1	Gm35256-202	2107	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000307351.1	Gm35256-205	1171	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000307352.1	Gm35256-206	1118	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000307358.1	Gm35256-212	937	No protein	-	lncRNA	-
ENSMUST00000307354.1	Gm35256-208	888	No protein	-	lncRNA	-
ENSMUST00000307355.1	Gm35256-209	860	No protein	-	lncRNA	-
ENSMUST00000307353.1	Gm35256-207	751	No protein	-	lncRNA	-
ENSMUST00000307359.1	Gm35256-213	735	No protein	-	lncRNA	-
ENSMUST00000307356.1	Gm35256-210	689	No protein	-	lncRNA	-
ENSMUST00000307357.1	Gm35256-211	551	No protein	-	lncRNA	-

Summary

Statistics

Exons: 15, Coding exons: 0, Transcript length: 3,269 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000212780.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

CAGE supported TSS [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000212780.2 Gm35256-201

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Transcript: ENSMUST00000212780.2 Gm35256-201

Summary

About Us

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