Transcript: ENSMUST00000196278.3 Gm42161-201

Description

predicted gene, 42161 [Source:MGI Symbol;Acc:MGI:5625046]

Gene Synonyms

Gm43095

Location

Chromosome 5: 113,293,194-113,302,393 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1183 variant alleles and maps to 11 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000106659.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000377202.1	Gm42161-202	535	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000196278.3	Gm42161-201	885	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000377207.1	Gm42161-207	646	No protein	-	lncRNA	-
ENSMUST00000377206.1	Gm42161-206	645	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377208.1	Gm42161-208	562	No protein	-	lncRNA	-
ENSMUST00000377203.1	Gm42161-203	548	No protein	-	lncRNA	-
ENSMUST00000377205.1	Gm42161-205	538	No protein	-	lncRNA	-
ENSMUST00000377204.1	Gm42161-204	536	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 885 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000196278.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000196278.3 Gm42161-201

Summary

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Transcript: ENSMUST00000196278.3 Gm42161-201

Summary

About Us

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