Transcript: ENSMUST00000191898.3 Gm30340-201

Description

predicted gene, 30340 [Source:MGI Symbol;Acc:MGI:5589499]

Location

Chromosome 3: 17,382,858-17,616,413 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 14494 variant alleles and maps to 31 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000104411.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000291312.1	Gm30340-219	1694	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000191898.3	Gm30340-201	2458	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000291313.1	Gm30340-220	2029	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000291295.1	Gm30340-202	1501	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000291306.1	Gm30340-213	1483	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000291296.1	Gm30340-203	1352	No protein	-	lncRNA	-
ENSMUST00000291299.1	Gm30340-206	1298	No protein	-	lncRNA	-
ENSMUST00000291297.1	Gm30340-204	1136	No protein	-	lncRNA	-
ENSMUST00000291298.1	Gm30340-205	994	No protein	-	lncRNA	-
ENSMUST00000291314.1	Gm30340-221	915	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000291315.1	Gm30340-222	858	No protein	-	lncRNA	-
ENSMUST00000291305.1	Gm30340-212	833	No protein	-	lncRNA	-
ENSMUST00000291300.1	Gm30340-207	775	No protein	-	lncRNA	-
ENSMUST00000291308.1	Gm30340-215	662	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000291302.1	Gm30340-209	642	No protein	-	lncRNA	-
ENSMUST00000291317.1	Gm30340-224	624	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000291316.1	Gm30340-223	515	No protein	-	lncRNA	-
ENSMUST00000291301.1	Gm30340-208	507	No protein	-	lncRNA	-
ENSMUST00000291307.1	Gm30340-214	507	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000291303.1	Gm30340-210	480	No protein	-	lncRNA	-
ENSMUST00000291304.1	Gm30340-211	453	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000291309.1	Gm30340-216	435	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000291318.1	Gm30340-225	432	No protein	-	lncRNA	-
ENSMUST00000291310.1	Gm30340-217	386	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000291311.1	Gm30340-218	363	No protein	-	lncRNA	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 2,458 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000191898.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000191898.3 Gm30340-201

Summary

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Transcript: ENSMUST00000191898.3 Gm30340-201

Summary

About Us

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