Transcript: ENSMUST00000189288.2 F730311O21Rik-201

Description

RIKEN cDNA F730311O21 gene [Source:MGI Symbol;Acc:MGI:3643355]

Gene Synonyms

EG622304

Location

Chromosome 1: 132,269,761-132,277,364 forward strand.

About this transcript

This transcript has 3 exons, is associated with 946 variant alleles and maps to 45 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000100658.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000241796.2	F730311O21Rik-205	1157	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000189288.2	F730311O21Rik-201	5447	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000245452.1	F730311O21Rik-210	1577	No protein	-	lncRNA	-
ENSMUST00000246659.2	F730311O21Rik-211	1508	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000266204.1	F730311O21Rik-222	1496	No protein	-	lncRNA	-
ENSMUST00000266217.1	F730311O21Rik-235	1474	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000242454.1	F730311O21Rik-207	1426	No protein	-	lncRNA	-
ENSMUST00000266208.1	F730311O21Rik-226	1379	No protein	-	lncRNA	-
ENSMUST00000266199.1	F730311O21Rik-217	1370	No protein	-	lncRNA	-
ENSMUST00000246756.1	F730311O21Rik-212	1352	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000266216.1	F730311O21Rik-234	1350	No protein	-	lncRNA	-
ENSMUST00000241085.2	F730311O21Rik-204	1320	No protein	-	lncRNA	-
ENSMUST00000266209.1	F730311O21Rik-227	1296	No protein	-	lncRNA	-
ENSMUST00000246779.1	F730311O21Rik-213	1286	No protein	-	lncRNA	-
ENSMUST00000246875.1	F730311O21Rik-214	1283	No protein	-	lncRNA	-
ENSMUST00000266201.1	F730311O21Rik-219	1270	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244834.2	F730311O21Rik-208	1223	No protein	-	lncRNA	-
ENSMUST00000266212.1	F730311O21Rik-230	1211	No protein	-	lncRNA	-
ENSMUST00000266220.1	F730311O21Rik-238	1203	No protein	-	lncRNA	-
ENSMUST00000266213.1	F730311O21Rik-231	1194	No protein	-	lncRNA	-
ENSMUST00000266198.1	F730311O21Rik-216	1192	No protein	-	lncRNA	-
ENSMUST00000245444.1	F730311O21Rik-209	1191	No protein	-	lncRNA	-
ENSMUST00000266222.1	F730311O21Rik-240	1187	No protein	-	lncRNA	-
ENSMUST00000266219.1	F730311O21Rik-237	1172	No protein	-	lncRNA	-
ENSMUST00000266202.1	F730311O21Rik-220	1127	No protein	-	lncRNA	-
ENSMUST00000266206.1	F730311O21Rik-224	1123	No protein	-	lncRNA	-
ENSMUST00000266211.1	F730311O21Rik-229	1120	No protein	-	lncRNA	-
ENSMUST00000266205.1	F730311O21Rik-223	1110	No protein	-	lncRNA	-
ENSMUST00000266218.1	F730311O21Rik-236	1108	No protein	-	lncRNA	-
ENSMUST00000266215.1	F730311O21Rik-233	1102	No protein	-	lncRNA	-
ENSMUST00000266214.1	F730311O21Rik-232	1086	No protein	-	lncRNA	-
ENSMUST00000266210.1	F730311O21Rik-228	1050	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000240967.1	F730311O21Rik-203	1034	No protein	-	lncRNA	-
ENSMUST00000240943.2	F730311O21Rik-202	1021	No protein	-	lncRNA	-
ENSMUST00000266223.1	F730311O21Rik-241	999	No protein	-	lncRNA	-
ENSMUST00000241871.2	F730311O21Rik-206	958	No protein	-	lncRNA	-
ENSMUST00000247708.2	F730311O21Rik-215	919	No protein	-	lncRNA	-
ENSMUST00000266203.1	F730311O21Rik-221	911	No protein	-	lncRNA	-
ENSMUST00000266221.1	F730311O21Rik-239	905	No protein	-	lncRNA	-
ENSMUST00000266207.1	F730311O21Rik-225	884	No protein	-	lncRNA	-
ENSMUST00000266200.1	F730311O21Rik-218	809	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 5,447 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000189288.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000189288.2 F730311O21Rik-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000189288.2 F730311O21Rik-201

Summary

About Us

Get help

Our sister sites

Follow us