Transcript: ENSMUST00000186597.2 Gm10138-202

Description

predicted gene 10138 [Source:MGI Symbol;Acc:MGI:3708522]

Location

Chromosome 1: 151,218,485-151,220,982 reverse strand.

About this transcript

This transcript has 1 exon, is associated with 565 variant alleles and maps to 66 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000100954.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000345897.1	Gm10138-206	1290	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000186597.2	Gm10138-202	2498	No protein	-	lncRNA	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000245514.2	Gm10138-205	1294	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000240911.2	Gm10138-203	1282	No protein	-	lncRNA	-
ENSMUST00000345902.1	Gm10138-211	964	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345904.1	Gm10138-213	957	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345900.1	Gm10138-209	945	No protein	-	lncRNA	-
ENSMUST00000345907.1	Gm10138-216	842	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345901.1	Gm10138-210	836	No protein	-	lncRNA	-
ENSMUST00000345903.1	Gm10138-212	794	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345899.1	Gm10138-208	786	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345910.1	Gm10138-219	771	No protein	-	lncRNA	-
ENSMUST00000345905.1	Gm10138-214	760	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345911.1	Gm10138-220	668	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000185848.3	Gm10138-201	662	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000345913.1	Gm10138-222	638	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345908.1	Gm10138-217	634	No protein	-	lncRNA	-
ENSMUST00000345909.1	Gm10138-218	617	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000345906.1	Gm10138-215	598	No protein	-	lncRNA	-
ENSMUST00000345898.1	Gm10138-207	591	No protein	-	lncRNA	-
ENSMUST00000345912.1	Gm10138-221	589	No protein	-	lncRNA	-
ENSMUST00000242624.2	Gm10138-204	546	No protein	-	lncRNA	-
ENSMUST00000345914.1	Gm10138-223	536	No protein	-	lncRNA	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 2,498 bps,

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000186597.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000186597.2 Gm10138-202

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Transcript: ENSMUST00000186597.2 Gm10138-202

Summary

About Us

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