Transcript: ENSMUST00000186448.2 Gm29128-201

Description

predicted gene 29128 [Source:MGI Symbol;Acc:MGI:5579834]

Location

Chromosome 1: 31,175,107-31,189,186 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1472 variant alleles and maps to 18 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000100910.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000272879.1	Gm29128-203	1049	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000186448.2	Gm29128-201	2858	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000273039.1	Gm29128-223	1419	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000273032.1	Gm29128-216	1120	No protein	-	lncRNA	-
ENSMUST00000273043.1	Gm29128-227	1025	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000273042.1	Gm29128-226	933	No protein	-	lncRNA	-
ENSMUST00000273035.1	Gm29128-219	932	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000273036.1	Gm29128-220	929	No protein	-	lncRNA	-
ENSMUST00000272880.1	Gm29128-204	885	No protein	-	lncRNA	-
ENSMUST00000272887.1	Gm29128-211	874	No protein	-	lncRNA	-
ENSMUST00000273040.1	Gm29128-224	850	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000273037.1	Gm29128-221	846	No protein	-	lncRNA	-
ENSMUST00000273041.1	Gm29128-225	816	No protein	-	lncRNA	-
ENSMUST00000273033.1	Gm29128-217	806	No protein	-	lncRNA	-
ENSMUST00000273034.1	Gm29128-218	790	No protein	-	lncRNA	-
ENSMUST00000191364.3	Gm29128-202	756	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000273044.1	Gm29128-228	651	No protein	-	lncRNA	-
ENSMUST00000273038.1	Gm29128-222	637	No protein	-	lncRNA	-
ENSMUST00000272881.1	Gm29128-205	611	No protein	-	lncRNA	-
ENSMUST00000272885.1	Gm29128-209	543	No protein	-	lncRNA	-
ENSMUST00000272882.1	Gm29128-206	496	No protein	-	lncRNA	-
ENSMUST00000272890.1	Gm29128-214	493	No protein	-	lncRNA	-
ENSMUST00000272888.1	Gm29128-212	481	No protein	-	lncRNA	-
ENSMUST00000272884.1	Gm29128-208	475	No protein	-	lncRNA	-
ENSMUST00000272886.1	Gm29128-210	458	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000272883.1	Gm29128-207	440	No protein	-	lncRNA	-
ENSMUST00000272889.1	Gm29128-213	404	No protein	-	lncRNA	-
ENSMUST00000273045.1	Gm29128-229	321	No protein	-	lncRNA	-
ENSMUST00000272891.1	Gm29128-215	276	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,858 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000186448.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000186448.2 Gm29128-201

Summary

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Transcript: ENSMUST00000186448.2 Gm29128-201

Summary

About Us

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