Transcript: ENSMUST00000184936.9 Gm64819-202

Description

predicted gene, 64819 [Source:MGI Symbol;Acc:MGI:7812541]

Location

Chromosome 17: 3,112,710-3,134,346 reverse strand.

About this transcript

This transcript has 9 exons, is associated with 1961 variant alleles and maps to 167 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000121378.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000184936.9	Gm64819-202	3321	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000274474.1	Gm64819-203	3214	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000274481.1	Gm64819-210	2095	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000274479.1	Gm64819-208	2058	No protein	-	lncRNA	-
ENSMUST00000274482.1	Gm64819-211	1760	No protein	-	lncRNA	-
ENSMUST00000127960.3	Gm64819-201	1713	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000274484.1	Gm64819-213	1571	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000274475.1	Gm64819-204	1304	No protein	-	lncRNA	-
ENSMUST00000274477.1	Gm64819-206	1167	No protein	-	lncRNA	-
ENSMUST00000274480.1	Gm64819-209	1062	No protein	-	lncRNA	-
ENSMUST00000274483.1	Gm64819-212	919	No protein	-	lncRNA	-
ENSMUST00000274476.1	Gm64819-205	793	No protein	-	lncRNA	-
ENSMUST00000274485.1	Gm64819-214	787	No protein	-	lncRNA	-
ENSMUST00000274478.1	Gm64819-207	597	No protein	-	lncRNA	-
ENSMUST00000274486.1	Gm64819-215	550	No protein	-	lncRNA	-

Summary

Statistics

Exons: 9, Coding exons: 0, Transcript length: 3,321 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000184936.9

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENSMUST00000184936.9 Gm64819-202

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Transcript: ENSMUST00000184936.9 Gm64819-202

Summary

About Us

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