Transcript: ENSMUST00000181852.3 Gm26777-201

Description

predicted gene, 26777 [Source:MGI Symbol;Acc:MGI:5477271]

Location

Chromosome 12: 80,556,724-80,565,690 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 932 variant alleles and maps to 39 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000097801.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000250688.1	Gm26777-202	1613	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000181852.3	Gm26777-201	2574	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000250692.1	Gm26777-206	2349	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000250691.1	Gm26777-205	1942	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000250690.1	Gm26777-204	1857	No protein	-	lncRNA	-
ENSMUST00000250693.1	Gm26777-207	1759	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000250694.1	Gm26777-208	1586	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000250698.1	Gm26777-212	1419	No protein	-	lncRNA	-
ENSMUST00000250695.1	Gm26777-209	1389	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000250696.1	Gm26777-210	1223	No protein	-	lncRNA	-
ENSMUST00000250689.1	Gm26777-203	1216	No protein	-	lncRNA	-
ENSMUST00000250699.1	Gm26777-213	909	No protein	-	lncRNA	-
ENSMUST00000250697.1	Gm26777-211	703	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,574 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000181852.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

CAGE supported TSS [Definitions]

Transcript: ENSMUST00000181852.3 Gm26777-201

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Transcript: ENSMUST00000181852.3 Gm26777-201

Summary

About Us

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