Transcript: ENSMUST00000181706.8 Foxl2os-201

Description

forkhead box L2, opposite strand [Source:MGI Symbol;Acc:MGI:3614944]

Gene Synonyms

ENSMUSG00000074122

Location

Chromosome 9: 98,831,834-98,837,352 reverse strand.

About this transcript

This transcript has 8 exons, is associated with 916 variant alleles and maps to 105 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000097072.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000189148.2	Foxl2os-203	672	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000188093.2	Foxl2os-202	410	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000329581.1	Foxl2os-204	1628	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000181706.8	Foxl2os-201	3095	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000329582.1	Foxl2os-205	2533	No protein	-	lncRNA	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 3,095 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENSMUST00000181706.8

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

NAGNAG splice site [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000181706.8 Foxl2os-201

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Transcript: ENSMUST00000181706.8 Foxl2os-201

Summary

About Us

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