Transcript: ENSMUST00000181185.2 Gm47512-201

Description

predicted gene, 47512 [Source:MGI Symbol;Acc:MGI:6096503]

Location

Chromosome 10: 34,171,908-34,174,903 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 580 variant alleles and maps to 38 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000097274.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000363007.1	Gm47512-204	408	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000181185.2	Gm47512-201	2777	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000214449.2	Gm47512-202	1641	No protein	-	lncRNA	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000363016.1	Gm47512-213	1106	No protein	-	lncRNA	-
ENSMUST00000363013.1	Gm47512-210	1028	No protein	-	lncRNA	-
ENSMUST00000363011.1	Gm47512-208	672	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000363010.1	Gm47512-207	671	No protein	-	lncRNA	-
ENSMUST00000363009.1	Gm47512-206	662	No protein	-	lncRNA	-
ENSMUST00000216701.3	Gm47512-203	650	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000363012.1	Gm47512-209	615	No protein	-	lncRNA	-
ENSMUST00000363019.1	Gm47512-216	615	No protein	-	lncRNA	-
ENSMUST00000363008.1	Gm47512-205	591	No protein	-	lncRNA	-
ENSMUST00000363018.1	Gm47512-215	581	No protein	-	lncRNA	-
ENSMUST00000363017.1	Gm47512-214	577	No protein	-	lncRNA	-
ENSMUST00000363014.1	Gm47512-211	505	No protein	-	lncRNA	-
ENSMUST00000363015.1	Gm47512-212	497	No protein	-	lncRNA	-
ENSMUST00000363020.1	Gm47512-217	478	No protein	-	lncRNA	-
ENSMUST00000363297.1	Gm47512-218	470	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,777 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000181185.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000181185.2 Gm47512-201

Summary

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Transcript: ENSMUST00000181185.2 Gm47512-201

Summary

About Us

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