Transcript: ENSMUST00000177482.8 Gm20618-202

Description

predicted gene 20618 [Source:MGI Symbol;Acc:MGI:5313065]

Location

Chromosome 6: 6,603,219-6,684,806 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 5496 variant alleles and maps to 40 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000093675.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000273011.1	Gm20618-203	1446	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000273013.1	Gm20618-205	2647	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000177161.3	Gm20618-201	1559	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000273015.1	Gm20618-207	1476	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000273014.1	Gm20618-206	1464	No protein	-	lncRNA	-
ENSMUST00000273012.1	Gm20618-204	1426	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000177482.8	Gm20618-202	1227	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000273016.1	Gm20618-208	1082	No protein	-	lncRNA	-
ENSMUST00000273017.1	Gm20618-209	839	No protein	-	lncRNA	-
ENSMUST00000273020.1	Gm20618-212	820	No protein	-	lncRNA	-
ENSMUST00000273021.1	Gm20618-213	777	No protein	-	lncRNA	-
ENSMUST00000273018.1	Gm20618-210	744	No protein	-	lncRNA	-
ENSMUST00000273019.1	Gm20618-211	408	No protein	-	lncRNA	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,227 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENSMUST00000177482.8

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000177482.8 Gm20618-202

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Transcript: ENSMUST00000177482.8 Gm20618-202

Summary

About Us

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