Transcript: ENSMUST00000146145.4 2310014F06Rik-201

Description

RIKEN cDNA 2310014F06 gene [Source:MGI Symbol;Acc:MGI:1916875]

Location

Chromosome 7: 112,211,767-112,279,265 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 3886 variant alleles and maps to 36 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000085945.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000287480.1	2310014F06Rik-203	932	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000146145.4	2310014F06Rik-201	1567	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000211302.3	2310014F06Rik-202	1565	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000287486.1	2310014F06Rik-209	1201	No protein	-	lncRNA	-
ENSMUST00000287484.1	2310014F06Rik-207	1127	No protein	-	lncRNA	-
ENSMUST00000287488.1	2310014F06Rik-211	1091	No protein	-	lncRNA	-
ENSMUST00000287489.1	2310014F06Rik-212	1052	No protein	-	lncRNA	-
ENSMUST00000287493.1	2310014F06Rik-216	1029	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000287487.1	2310014F06Rik-210	956	No protein	-	lncRNA	-
ENSMUST00000287485.1	2310014F06Rik-208	937	No protein	-	lncRNA	-
ENSMUST00000287494.1	2310014F06Rik-217	896	No protein	-	lncRNA	-
ENSMUST00000287492.1	2310014F06Rik-215	889	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000287490.1	2310014F06Rik-213	888	No protein	-	lncRNA	-
ENSMUST00000287483.1	2310014F06Rik-206	849	No protein	-	lncRNA	-
ENSMUST00000287499.1	2310014F06Rik-222	845	No protein	-	lncRNA	-
ENSMUST00000287491.1	2310014F06Rik-214	788	No protein	-	lncRNA	-
ENSMUST00000287482.1	2310014F06Rik-205	782	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000287481.1	2310014F06Rik-204	774	No protein	-	lncRNA	-
ENSMUST00000287497.1	2310014F06Rik-220	760	No protein	-	lncRNA	-
ENSMUST00000287496.1	2310014F06Rik-219	753	No protein	-	lncRNA	-
ENSMUST00000287504.1	2310014F06Rik-227	746	No protein	-	lncRNA	-
ENSMUST00000287495.1	2310014F06Rik-218	721	No protein	-	lncRNA	-
ENSMUST00000287514.1	2310014F06Rik-237	720	No protein	-	lncRNA	-
ENSMUST00000287507.1	2310014F06Rik-230	717	No protein	-	lncRNA	-
ENSMUST00000287503.1	2310014F06Rik-226	714	No protein	-	lncRNA	-
ENSMUST00000287512.1	2310014F06Rik-235	714	No protein	-	lncRNA	-
ENSMUST00000287510.1	2310014F06Rik-233	694	No protein	-	lncRNA	-
ENSMUST00000287506.1	2310014F06Rik-229	681	No protein	-	lncRNA	-
ENSMUST00000287501.1	2310014F06Rik-224	672	No protein	-	lncRNA	-
ENSMUST00000287509.1	2310014F06Rik-232	670	No protein	-	lncRNA	-
ENSMUST00000287500.1	2310014F06Rik-223	660	No protein	-	lncRNA	-
ENSMUST00000287502.1	2310014F06Rik-225	658	No protein	-	lncRNA	-
ENSMUST00000287513.1	2310014F06Rik-236	657	No protein	-	lncRNA	-
ENSMUST00000287508.1	2310014F06Rik-231	651	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000287498.1	2310014F06Rik-221	643	No protein	-	lncRNA	-
ENSMUST00000287511.1	2310014F06Rik-234	643	No protein	-	lncRNA	-
ENSMUST00000287517.1	2310014F06Rik-240	628	No protein	-	lncRNA	-
ENSMUST00000287515.1	2310014F06Rik-238	614	No protein	-	lncRNA	-
ENSMUST00000287505.1	2310014F06Rik-228	572	No protein	-	lncRNA	-
ENSMUST00000287518.1	2310014F06Rik-241	571	No protein	-	lncRNA	-
ENSMUST00000287516.1	2310014F06Rik-239	334	No protein	-	lncRNA	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,567 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000146145.4

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000146145.4 2310014F06Rik-201

Summary

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Transcript: ENSMUST00000146145.4 2310014F06Rik-201

Summary

About Us

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