Transcript: ENSMUST00000129983.3 Gm68924-201

Description

predicted gene, 68924 [Source:MGI Symbol;Acc:MGI:7820671]

Location

Chromosome 9: 78,335,176-78,340,708 forward strand.

About this transcript

This transcript has 5 exons, is associated with 832 variant alleles and maps to 16 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000121781.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000129983.3	Gm68924-201	1928	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000322061.1	Gm68924-212	1762	No protein	-	lncRNA	-
ENSMUST00000144982.4	Gm68924-202	1692	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000322056.1	Gm68924-207	928	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000322060.1	Gm68924-211	768	No protein	-	lncRNA	-
ENSMUST00000322064.1	Gm68924-215	739	No protein	-	lncRNA	-
ENSMUST00000322054.1	Gm68924-205	722	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000322058.1	Gm68924-209	710	No protein	-	lncRNA	-
ENSMUST00000322052.1	Gm68924-203	670	No protein	-	lncRNA	-
ENSMUST00000322057.1	Gm68924-208	646	No protein	-	lncRNA	-
ENSMUST00000322053.1	Gm68924-204	624	No protein	-	lncRNA	-
ENSMUST00000322059.1	Gm68924-210	606	No protein	-	lncRNA	-
ENSMUST00000322055.1	Gm68924-206	602	No protein	-	lncRNA	-
ENSMUST00000322066.1	Gm68924-217	556	No protein	-	lncRNA	-
ENSMUST00000322065.1	Gm68924-216	499	No protein	-	lncRNA	-
ENSMUST00000322063.1	Gm68924-214	463	No protein	-	lncRNA	-
ENSMUST00000322062.1	Gm68924-213	425	No protein	-	lncRNA	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,928 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENSMUST00000129983.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENSMUST00000129983.3 Gm68924-201

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Transcript: ENSMUST00000129983.3 Gm68924-201

Summary

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