Transcript: ENSMUST00000128589.4 Gm13391-201

Description

predicted gene 13391 [Source:MGI Symbol;Acc:MGI:3651526]

Location

Chromosome 2: 6,476,817-6,477,964 forward strand.

About this transcript

This transcript has 2 exons, is associated with 638 variant alleles and maps to 46 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000086109.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000301741.1	Gm13391-206	714	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000301754.1	Gm13391-219	1697	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000301755.1	Gm13391-220	994	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000301749.1	Gm13391-214	982	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000301753.1	Gm13391-218	934	No protein	-	lncRNA	-
ENSMUST00000247321.2	Gm13391-204	839	No protein	-	lncRNA	-
ENSMUST00000128589.4	Gm13391-201	818	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000301745.1	Gm13391-210	818	No protein	-	lncRNA	-
ENSMUST00000147685.2	Gm13391-202	816	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000301744.1	Gm13391-209	788	No protein	-	lncRNA	-
ENSMUST00000301751.1	Gm13391-216	746	No protein	-	lncRNA	-
ENSMUST00000301746.1	Gm13391-211	738	No protein	-	lncRNA	-
ENSMUST00000301752.1	Gm13391-217	701	No protein	-	lncRNA	-
ENSMUST00000246933.2	Gm13391-203	679	No protein	-	lncRNA	-
ENSMUST00000301759.1	Gm13391-223	673	No protein	-	lncRNA	-
ENSMUST00000301756.1	Gm13391-221	666	No protein	-	lncRNA	-
ENSMUST00000301747.1	Gm13391-212	664	No protein	-	lncRNA	-
ENSMUST00000301748.1	Gm13391-213	645	No protein	-	lncRNA	-
ENSMUST00000301742.1	Gm13391-207	626	No protein	-	lncRNA	-
ENSMUST00000301750.1	Gm13391-215	626	No protein	-	lncRNA	-
ENSMUST00000301740.1	Gm13391-205	622	No protein	-	lncRNA	-
ENSMUST00000301743.1	Gm13391-208	602	No protein	-	lncRNA	-
ENSMUST00000301762.1	Gm13391-224	495	No protein	-	lncRNA	-
ENSMUST00000301757.1	Gm13391-222	486	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 818 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000128589.4

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000128589.4 Gm13391-201

Summary

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Transcript: ENSMUST00000128589.4 Gm13391-201

Summary

About Us

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