Transcript: ENSMUST00000127817.4 Gm15326-201

Description

predicted gene 15326 [Source:MGI Symbol;Acc:MGI:3705205]

Location

Chromosome 13: 112,004,428-112,011,296 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1111 variant alleles and maps to 51 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000086111.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000253311.1	Gm15326-205	625	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000253628.1	Gm15326-227	1818	No protein	-	lncRNA	-
ENSMUST00000128198.4	Gm15326-202	1438	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000253626.1	Gm15326-225	1411	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000253627.1	Gm15326-226	1388	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000253625.1	Gm15326-224	1359	No protein	-	lncRNA	-
ENSMUST00000253313.1	Gm15326-207	1167	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000253610.1	Gm15326-209	1100	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000253620.1	Gm15326-219	1069	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000253621.1	Gm15326-220	1035	No protein	-	lncRNA	-
ENSMUST00000253618.1	Gm15326-217	1023	No protein	-	lncRNA	-
ENSMUST00000127817.4	Gm15326-201	1017	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000253617.1	Gm15326-216	950	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000253624.1	Gm15326-223	887	No protein	-	lncRNA	-
ENSMUST00000253613.1	Gm15326-212	824	No protein	-	lncRNA	-
ENSMUST00000253615.1	Gm15326-214	802	No protein	-	lncRNA	-
ENSMUST00000253616.1	Gm15326-215	775	No protein	-	lncRNA	-
ENSMUST00000253622.1	Gm15326-221	767	No protein	-	lncRNA	-
ENSMUST00000253623.1	Gm15326-222	673	No protein	-	lncRNA	-
ENSMUST00000139397.3	Gm15326-203	657	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000253611.1	Gm15326-210	647	No protein	-	lncRNA	-
ENSMUST00000244141.2	Gm15326-204	607	No protein	-	lncRNA	-
ENSMUST00000253614.1	Gm15326-213	591	No protein	-	lncRNA	-
ENSMUST00000253314.1	Gm15326-208	552	No protein	-	lncRNA	-
ENSMUST00000253619.1	Gm15326-218	533	No protein	-	lncRNA	-
ENSMUST00000253612.1	Gm15326-211	482	No protein	-	lncRNA	-
ENSMUST00000253312.1	Gm15326-206	432	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,017 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENSMUST00000127817.4

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000127817.4 Gm15326-201

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Transcript: ENSMUST00000127817.4 Gm15326-201

Summary

About Us

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