Transcript: ENSMUST00000122050.2 H2ab3-201

Description

H2A.B variant histone 3 [Source:MGI Symbol;Acc:MGI:3644875]

Gene Synonyms

EG624957, H2A.Bbd3, H2afb3, H2afb3-ps

Location

Chromosome X: 119,222,445-119,222,792 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 10 domains and features, is associated with 665 variant alleles and maps to 104 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000083616.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000122050.2	H2ab3-201	348	115aa	ENSMUSP00000138211.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59774	S4R1G7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 348 bps, Translation length: 115 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS59774

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000122050.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENSMUST00000122050.2 H2ab3-201

Summary

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Transcript: ENSMUST00000122050.2 H2ab3-201

Summary

About Us

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