Transcript: ENSMUST00000070257.15 Ascc2-201

Description

activating signal cointegrator 1 complex subunit 2 [Source:MGI Symbol;Acc:MGI:1922702]

Gene Synonyms

1700011I11Rik, 2610034L15Rik, ASC1p100

Location

Chromosome 11: 4,587,747-4,635,700 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 17 domains and features, is associated with 2909 variant alleles and maps to 365 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000020412.18 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000070257.15	Ascc2-201	4965	749aa	ENSMUSP00000063272.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS24387	Q91WR3-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000458632.1	Ascc2-208	4962	749aa	ENSMUSP00000236995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS24387	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000458633.1	Ascc2-209	4953	745aa	ENSMUSP00000236996.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000458636.1	Ascc2-212	4938	675aa	ENSMUSP00000236999.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000109930.4	Ascc2-202	4845	709aa	ENSMUSP00000105556.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q91WR3-2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000458635.1	Ascc2-211	6741	337aa	ENSMUSP00000236998.1	Nonsense mediated decay		-	-
ENSMUST00000458630.1	Ascc2-206	6167	518aa	ENSMUSP00000236993.1	Nonsense mediated decay		-	-
ENSMUST00000561474.1	Ascc2-213	6014	208aa	ENSMUSP00000339837.1	Nonsense mediated decay		-	-
ENSMUST00000458627.1	Ascc2-203	5103	208aa	ENSMUSP00000236990.1	Nonsense mediated decay		-	-
ENSMUST00000561475.1	Ascc2-214	4994	317aa	ENSMUSP00000339838.1	Nonsense mediated decay		-	-
ENSMUST00000458631.1	Ascc2-207	4972	303aa	ENSMUSP00000236994.1	Nonsense mediated decay		-	-
ENSMUST00000458628.1	Ascc2-204	4922	518aa	ENSMUSP00000236991.1	Nonsense mediated decay		-	-
ENSMUST00000458634.1	Ascc2-210	4897	303aa	ENSMUSP00000236997.1	Nonsense mediated decay		-	-
ENSMUST00000458629.1	Ascc2-205	4763	208aa	ENSMUSP00000236992.1	Nonsense mediated decay		-	-
ENSMUST00000561476.1	Ascc2-215	673	37aa	ENSMUSP00000339839.1	Nonsense mediated decay		-	-

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 4,965 bps, Translation length: 749 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q91WR3

CCDS

This transcript is a member of the Mouse CCDS set: CCDS24387

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000070257.15

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Upcoming Ensembl Platform Transition

Transcript: ENSMUST00000070257.15 Ascc2-201

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Transcript: ENSMUST00000070257.15 Ascc2-201

Summary

About Us

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