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Mouse (GRCm39)
Description

listerin E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:1926163]

Gene Synonyms

4930528H02Rik, Listerin, Rnf160, Zfp294

Location
About this transcript

This transcript has 30 exons, is annotated with 22 domains and features, is associated with 3427 variant alleles and maps to 968 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000039449.10Ltn1-20177441767aaENSMUSP00000038775.8
 
Protein coding
CCDS37382Q6A009 Ensembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENSMUST00000441119.1Ltn1-21478371798aaENSMUSP00000219482.1
 
Protein coding
-GENCODE Basic
ENSMUST00000441115.1Ltn1-21077411766aaENSMUSP00000219478.1
 
Protein coding
-GENCODE Basic
ENSMUST00000441118.1Ltn1-21377381765aaENSMUSP00000219481.1
 
Protein coding
-GENCODE Basic
ENSMUST00000441120.1Ltn1-21577381765aaENSMUSP00000219483.1
 
Protein coding
-GENCODE Basic
ENSMUST00000441114.1Ltn1-20977321763aaENSMUSP00000219477.1
 
Protein coding
-GENCODE Basic
ENSMUST00000441116.1Ltn1-21177021753aaENSMUSP00000219479.1
 
Protein coding
-GENCODE Basic
ENSMUST00000558901.1Ltn1-22076691742aaENSMUSP00000337264.1
 
Protein coding
-GENCODE Basic
ENSMUST00000441108.1Ltn1-20376451734aaENSMUSP00000219471.1
 
Protein coding
-GENCODE Basic
ENSMUST00000441109.1Ltn1-20476171750aaENSMUSP00000219472.1
 
Protein coding
-GENCODE Basic
ENSMUST00000441111.1Ltn1-20675701709aaENSMUSP00000219474.1
 
Protein coding
-GENCODE Basic
ENSMUST00000441110.1Ltn1-20575491702aaENSMUSP00000219473.1
 
Protein coding
-GENCODE Basic
ENSMUST00000441121.1Ltn1-21652831634aaENSMUSP00000219484.1
 
Protein coding
-GENCODE Basic
ENSMUST00000441122.1Ltn1-21751821617aaENSMUSP00000219485.1
 
Protein coding
-GENCODE Basic
ENSMUST00000441124.1Ltn1-2192448723aaENSMUSP00000219487.1
 
Protein coding
-GENCODE PrimaryGENCODE Basic
ENSMUST00000232095.3Ltn1-2022410724aaENSMUSP00000156299.2
 
Protein coding
Q14B86 GENCODE Basic
ENSMUST00000572278.1Ltn1-221716119aaENSMUSP00000350641.1
 
Protein coding
-GENCODE PrimaryGENCODE Basic
ENSMUST00000441117.1Ltn1-2127617755aaENSMUSP00000219480.1
 
Nonsense mediated decay
--
ENSMUST00000441113.1Ltn1-20873261176aaENSMUSP00000219476.1
 
Nonsense mediated decay
--
ENSMUST00000441112.1Ltn1-20769961508aaENSMUSP00000219475.1
 
Nonsense mediated decay
--
ENSMUST00000441123.1Ltn1-2183784755aaENSMUSP00000219486.1
 
Nonsense mediated decay
--
Statistics

Exons: 30, Coding exons: 30, Transcript length: 7,744 bps, Translation length: 1,767 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6A009

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37382

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000039449.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.