Transcript: ENSMUST00000026218.8 Cwf19l1-201

Description

CWF19 like cell cycle control factor 1 [Source:MGI Symbol;Acc:MGI:1919752]

Gene Synonyms

2610528C06Rik

Location

Chromosome 19: 44,096,060-44,124,315 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 10 domains and features, is associated with 1934 variant alleles and maps to 364 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000025200.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000026218.8	Cwf19l1-201	4597	537aa	ENSMUSP00000026218.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37995	Q8CI33-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000451184.1	Cwf19l1-210	4546	520aa	ENSMUSP00000229547.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000571778.1	Cwf19l1-218	269	38aa	ENSMUSP00000350141.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000451187.1	Cwf19l1-213	4490	113aa	ENSMUSP00000229550.1	Nonsense mediated decay		-	-
ENSMUST00000451188.1	Cwf19l1-214	3657	161aa	ENSMUSP00000229551.1	Nonsense mediated decay		-	-
ENSMUST00000451185.1	Cwf19l1-211	3646	113aa	ENSMUSP00000229548.1	Nonsense mediated decay		-	-
ENSMUST00000451189.1	Cwf19l1-215	2886	113aa	ENSMUSP00000229552.1	Nonsense mediated decay		-	-
ENSMUST00000451183.1	Cwf19l1-209	2857	161aa	ENSMUSP00000229546.1	Nonsense mediated decay		-	-
ENSMUST00000451186.1	Cwf19l1-212	2750	113aa	ENSMUSP00000229549.1	Nonsense mediated decay		-	-
ENSMUST00000451191.1	Cwf19l1-217	2112	113aa	ENSMUSP00000229554.1	Nonsense mediated decay		-	-
ENSMUST00000451190.1	Cwf19l1-216	2103	161aa	ENSMUSP00000229553.1	Nonsense mediated decay		-	-
ENSMUST00000237939.2	Cwf19l1-208	963	296aa	ENSMUSP00000157760.2	Nonsense mediated decay		A0A494B9Q5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000237415.2	Cwf19l1-207	794	113aa	ENSMUSP00000158411.2	Nonsense mediated decay		A0A494BBD4	-
ENSMUST00000236156.2	Cwf19l1-203	764	113aa	ENSMUSP00000158054.2	Nonsense mediated decay		A0A494BBD4	-
ENSMUST00000237067.2	Cwf19l1-205	4068	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000235288.2	Cwf19l1-202	1470	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000237250.2	Cwf19l1-206	771	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000236626.2	Cwf19l1-204	467	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 4,597 bps, Translation length: 537 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8CI33

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37995

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000026218.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Upcoming Ensembl Platform Transition

Transcript: ENSMUST00000026218.8 Cwf19l1-201

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Transcript: ENSMUST00000026218.8 Cwf19l1-201

Summary

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