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Mouse (GRCm39)
Description

small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha [Source:MGI Symbol;Acc:MGI:1098703]

Gene Synonyms

5330427H01Rik, D10Ertd190e, Sgt

Location
About this transcript

This transcript has 12 exons, is annotated with 21 domains and features, is associated with 1141 variant alleles and maps to 230 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000218208.3Sgta-2022040314aaENSMUSP00000151949.2
 
Protein coding
Q8BJU0-2 Ensembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS ALT1TSL:1
ENSMUST00000500919.1Sgta-2733232314aaENSMUSP00000279282.1
 
Protein coding
Q3TN35 GENCODE BasicAPPRIS ALT1
ENSMUST00000500922.1Sgta-2762360314aaENSMUSP00000279285.1
 
Protein coding
Q3TN35 GENCODE BasicAPPRIS ALT1
ENSMUST00000500910.1Sgta-2642292314aaENSMUSP00000279273.1
 
Protein coding
Q3TN35 GENCODE BasicAPPRIS ALT1
ENSMUST00000500905.1Sgta-2592250314aaENSMUSP00000279268.1
 
Protein coding
Q3TN35 GENCODE BasicAPPRIS ALT1
ENSMUST00000500857.1Sgta-2112233314aaENSMUSP00000279220.1
 
Protein coding
Q3TN35 GENCODE BasicAPPRIS ALT1
ENSMUST00000500888.1Sgta-2422226327aaENSMUSP00000279251.1
 
Protein coding
-GENCODE Basic
ENSMUST00000500860.1Sgta-2142218315aaENSMUSP00000279223.1
 
Protein coding
CCDS35990-GENCODE BasicAPPRIS P3
ENSMUST00000500879.1Sgta-2332208328aaENSMUSP00000279242.1
 
Protein coding
-GENCODE Basic
ENSMUST00000500890.1Sgta-2442208309aaENSMUSP00000279253.1
 
Protein coding
-GENCODE Basic
ENSMUST00000500887.1Sgta-2412182305aaENSMUSP00000279250.1
 
Protein coding
-GENCODE Basic
ENSMUST00000500925.1Sgta-2792144315aaENSMUSP00000279288.1
 
Protein coding
CCDS35990-GENCODE BasicAPPRIS P3
ENSMUST00000500927.1Sgta-2812144315aaENSMUSP00000279290.1
 
Protein coding
CCDS35990-GENCODE BasicAPPRIS P3
ENSMUST00000500924.1Sgta-2782142314aaENSMUSP00000279287.1
 
Protein coding
Q3TN35 GENCODE BasicAPPRIS ALT1
ENSMUST00000547431.1Sgta-2842130314aaENSMUSP00000325794.1
 
Protein coding
Q3TN35 GENCODE BasicAPPRIS ALT1
ENSMUST00000500912.1Sgta-2662123315aaENSMUSP00000279275.1
 
Protein coding
CCDS35990-GENCODE BasicAPPRIS P3
ENSMUST00000500909.1Sgta-2632122314aaENSMUSP00000279272.1
 
Protein coding
Q3TN35 GENCODE BasicAPPRIS ALT1
ENSMUST00000500896.1Sgta-2502111314aaENSMUSP00000279259.1
 
Protein coding
Q3TN35 GENCODE BasicAPPRIS ALT1
ENSMUST00000500915.1Sgta-2692111315aaENSMUSP00000279278.1
 
Protein coding
CCDS35990-GENCODE BasicAPPRIS P3
ENSMUST00000500895.1Sgta-2492091315aaENSMUSP00000279258.1
 
Protein coding
CCDS35990-GENCODE BasicAPPRIS P3
ENSMUST00000500875.1Sgta-2292089314aaENSMUSP00000279238.1
 
Protein coding
Q3TN35 GENCODE BasicAPPRIS ALT1
ENSMUST00000500928.1Sgta-2822071314aaENSMUSP00000279291.1
 
Protein coding
Q3TN35 GENCODE BasicAPPRIS ALT1
ENSMUST00000500906.1Sgta-2602069315aaENSMUSP00000279269.1
 
Protein coding
CCDS35990-GENCODE BasicAPPRIS P3
ENSMUST00000500907.1Sgta-2612067314aaENSMUSP00000279270.1
 
Protein coding
Q3TN35 GENCODE BasicAPPRIS ALT1
ENSMUST00000500894.1Sgta-2482062315aaENSMUSP00000279257.1
 
Protein coding
CCDS35990-GENCODE BasicAPPRIS P3
ENSMUST00000500873.1Sgta-2272061314aaENSMUSP00000279236.1
 
Protein coding
Q3TN35 GENCODE BasicAPPRIS ALT1
ENSMUST00000500855.1Sgta-2092050308aaENSMUSP00000279218.1
 
Protein coding
-GENCODE Basic
ENSMUST00000500863.1Sgta-2172049313aaENSMUSP00000279226.1
 
Protein coding
-GENCODE BasicAPPRIS ALT1
ENSMUST00000500865.1Sgta-2192047309aaENSMUSP00000279228.1
 
Protein coding
-GENCODE Basic
ENSMUST00000500854.1Sgta-2082046328aaENSMUSP00000279217.1
 
Protein coding
-GENCODE Basic
ENSMUST00000005067.7Sgta-2012045315aaENSMUSP00000005067.6
 
Protein coding
CCDS35990Q8BJU0-1 GENCODE BasicAPPRIS P3TSL:1
ENSMUST00000500861.1Sgta-2152043327aaENSMUSP00000279224.1
 
Protein coding
-GENCODE Basic
ENSMUST00000500911.1Sgta-2652034310aaENSMUSP00000279274.1
 
Protein coding
-GENCODE Basic
ENSMUST00000500923.1Sgta-2772032314aaENSMUSP00000279286.1
 
Protein coding
Q3TN35 GENCODE BasicAPPRIS ALT1
ENSMUST00000500872.1Sgta-2262031309aaENSMUSP00000279235.1
 
Protein coding
-GENCODE Basic
ENSMUST00000500918.1Sgta-2722031323aaENSMUSP00000279281.1
 
Protein coding
-GENCODE Basic
ENSMUST00000500856.1Sgta-2102022306aaENSMUSP00000279219.1
 
Protein coding
-GENCODE Basic
ENSMUST00000500869.1Sgta-2232019305aaENSMUSP00000279232.1
 
Protein coding
-GENCODE Basic
ENSMUST00000500880.1Sgta-2341984293aaENSMUSP00000279243.1
 
Protein coding
-GENCODE Basic
ENSMUST00000500885.1Sgta-2391980294aaENSMUSP00000279248.1
 
Protein coding
-GENCODE Basic
ENSMUST00000219401.2Sgta-205869211aaENSMUSP00000151345.2
 
Protein coding
A0A1W2P6P1 TSL:2CDS 3' incomplete
ENSMUST00000220317.2Sgta-207775166aaENSMUSP00000151678.2
 
Protein coding
A0A1W2P7I5 TSL:3CDS 3' incomplete
ENSMUST00000500904.1Sgta-2583146133aaENSMUSP00000279267.1
 
Nonsense mediated decay
--
ENSMUST00000500882.1Sgta-236295599aaENSMUSP00000279245.1
 
Nonsense mediated decay
--
ENSMUST00000500862.1Sgta-2162868133aaENSMUSP00000279225.1
 
Nonsense mediated decay
--
ENSMUST00000500916.1Sgta-2702830134aaENSMUSP00000279279.1
 
Nonsense mediated decay
--
ENSMUST00000500893.1Sgta-2472747180aaENSMUSP00000279256.1
 
Nonsense mediated decay
--
ENSMUST00000500914.1Sgta-2682467133aaENSMUSP00000279277.1
 
Nonsense mediated decay
--
ENSMUST00000500917.1Sgta-2712404290aaENSMUSP00000279280.1
 
Nonsense mediated decay
--
ENSMUST00000500881.1Sgta-2352379157aaENSMUSP00000279244.1
 
Nonsense mediated decay
--
ENSMUST00000500926.1Sgta-2802350237aaENSMUSP00000279289.1
 
Nonsense mediated decay
--
ENSMUST00000500908.1Sgta-2622346133aaENSMUSP00000279271.1
 
Nonsense mediated decay
--
ENSMUST00000500899.1Sgta-2532292133aaENSMUSP00000279262.1
 
Nonsense mediated decay
--
ENSMUST00000500858.1Sgta-2122281238aaENSMUSP00000279221.1
 
Nonsense mediated decay
--
ENSMUST00000500866.1Sgta-2202267237aaENSMUSP00000279229.1
 
Nonsense mediated decay
--
ENSMUST00000500921.1Sgta-2752216315aaENSMUSP00000279284.1
 
Nonsense mediated decay
CCDS35990--
ENSMUST00000500877.1Sgta-2312198158aaENSMUSP00000279240.1
 
Nonsense mediated decay
--
ENSMUST00000500897.1Sgta-2512184157aaENSMUSP00000279260.1
 
Nonsense mediated decay
--
ENSMUST00000500900.1Sgta-254211839aaENSMUSP00000279263.1
 
Nonsense mediated decay
--
ENSMUST00000500867.1Sgta-2212103133aaENSMUSP00000279230.1
 
Nonsense mediated decay
--
ENSMUST00000500920.1Sgta-274209239aaENSMUSP00000279283.1
 
Nonsense mediated decay
--
ENSMUST00000500898.1Sgta-2522085134aaENSMUSP00000279261.1
 
Nonsense mediated decay
--
ENSMUST00000500889.1Sgta-243208378aaENSMUSP00000279252.1
 
Nonsense mediated decay
--
ENSMUST00000500902.1Sgta-256207678aaENSMUSP00000279265.1
 
Nonsense mediated decay
--
ENSMUST00000500892.1Sgta-2462063238aaENSMUSP00000279255.1
 
Nonsense mediated decay
--
ENSMUST00000500891.1Sgta-2452060237aaENSMUSP00000279254.1
 
Nonsense mediated decay
--
ENSMUST00000500870.1Sgta-2242059314aaENSMUSP00000279233.1
 
Nonsense mediated decay
Q3TN35 -
ENSMUST00000500878.1Sgta-2322057181aaENSMUSP00000279241.1
 
Nonsense mediated decay
--
ENSMUST00000500876.1Sgta-2302055315aaENSMUSP00000279239.1
 
Nonsense mediated decay
CCDS35990--
ENSMUST00000500886.1Sgta-2402048180aaENSMUSP00000279249.1
 
Nonsense mediated decay
--
ENSMUST00000500884.1Sgta-2382039116aaENSMUSP00000279247.1
 
Nonsense mediated decay
--
ENSMUST00000500913.1Sgta-2672028276aaENSMUSP00000279276.1
 
Nonsense mediated decay
--
ENSMUST00000500864.1Sgta-2182001157aaENSMUSP00000279227.1
 
Nonsense mediated decay
--
ENSMUST00000500871.1Sgta-2251998131aaENSMUSP00000279234.1
 
Nonsense mediated decay
--
ENSMUST00000500868.1Sgta-222198646aaENSMUSP00000279231.1
 
Nonsense mediated decay
--
ENSMUST00000500883.1Sgta-2371986158aaENSMUSP00000279246.1
 
Nonsense mediated decay
--
ENSMUST00000500901.1Sgta-2551980132aaENSMUSP00000279264.1
 
Nonsense mediated decay
--
ENSMUST00000500859.1Sgta-213194139aaENSMUSP00000279222.1
 
Nonsense mediated decay
--
ENSMUST00000500929.1Sgta-2831915157aaENSMUSP00000279292.1
 
Nonsense mediated decay
--
ENSMUST00000500874.1Sgta-228188342aaENSMUSP00000279237.1
 
Nonsense mediated decay
--
ENSMUST00000500903.1Sgta-2571875138aaENSMUSP00000279266.1
 
Nonsense mediated decay
--
ENSMUST00000219126.2Sgta-203698No protein-
 
Retained intron
-TSL:5
ENSMUST00000219297.2Sgta-204693No protein-
 
Retained intron
-TSL:3
ENSMUST00000220202.2Sgta-206642No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 12, Coding exons: 10, Transcript length: 2,045 bps, Translation length: 315 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BJU0

CCDS

This transcript is a member of the Mouse CCDS set: CCDS35990

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000005067.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.