Description

neurotrophic tyrosine kinase, receptor, type 3 [Source:MGI Symbol;Acc:MGI:97385]

Location
About this transcript

This transcript has 14 exons, is annotated with 22 domains and features, is associated with 11 variations and maps to 29 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Ntrk3-001ENSMUST000000394313300825aaENSMUSP00000037909
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21371Q3TNY3 Q3TP58 Q3TRX1
Q6VNS1
NM_008746
NP_032772
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI2APPRIS candidate principal isoform (CCDS)
Glossary entry for APPRIS
APPRIS website
Ntrk3-002ENSMUST000000394382337612aaENSMUSP00000038324
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21372A9X3Y4 Q6VNS1 NM_182809
NP_877961
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Ntrk3-006ENSMUST000001952622774864aaENSMUSP00000141599
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q3TNY3 Q3TP58 Q3TRX1
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Ntrk3-005ENSMUST000001930022678839aaENSMUSP00000141534
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q3TNY3 Q3TP58 Q3TRX1
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Ntrk3-004ENSMUST00000151885868No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Ntrk3-003ENSMUST000001557952850No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Protein domains for ENSMUSP00000038324.7

Transcript-based displays