Description

neural cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:97281]

Location
About this transcript

This transcript has 18 exons, is annotated with 51 domains and features, is associated with 20 variations and maps to 28 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Ncam1-001ENSMUST000001935476050848aaENSMUSP00000142275
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS40617E9QB01 O08909 Q6LBT4
NM_001081445
NM_001113204
NP_001074914
NP_001106675
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI4APPRIS candidate principal isoform (longest CCDS)
Glossary entry for APPRIS
APPRIS website
Ncam1-005ENSMUST000001144762567725aaENSMUSP00000110120
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS40618E9Q589 O08909 Q61946
Q6LBT4
NM_010875
NP_035005
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Ncam1-006ENSMUST0000019425265641089aaENSMUSP00000142331
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q61945 Q61948 Q6LBT4
-CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Ncam1-002ENSMUST000001668113088849aaENSMUSP00000130668
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-O08909 O88682 Q6LBT4
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Ncam1-003ENSMUST000001925842525605aaENSMUSP00000141700
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-O08909 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Ncam1-004ENSMUST0000019484414649aaENSMUSP00000141730
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.

Protein domains for ENSMUSP00000130668.3

Transcript-based displays