Description

synapsin I [Source:MGI Symbol;Acc:MGI:98460]

Location
About this transcript

This transcript has 13 exons, is annotated with 11 domains and features, is associated with 7 variations and maps to 33 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Syn1-001ENSMUST000001153453261670aaENSMUSP00000111002
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS53018O88935 NM_001110780
NP_001104250
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Syn1-201ENSMUST000000818933209706aaENSMUSP00000080568
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS53017O88935 NM_013680
NP_038708
TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P4

PRINCIPAL4 - APPRIS candidate principal isoform (longest CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Protein domains for ENSMUSP00000080568.6

Transcript-based displays