Description

chloride channel Ka [Source:MGI Symbol;Acc:MGI:1329026]

About this transcript

This transcript has 20 exons, is annotated with 33 domains and features, is associated with 53 variations and maps to 35 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Clcnka-002ENSMUST000001057902511687aaENSMUSP00000101416
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS18871A2ADB4 Q9WUB7 NM_001146307
NP_001139779
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Clcnka-001ENSMUST000000426172428687aaENSMUSP00000048520
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS18871A2ADB4 Q9WUB7 NM_024412
NP_077723
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Clcnka-003ENSMUST00000133676655192aaENSMUSP00000122396
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2ADB4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Clcnka-004ENSMUST00000150334794No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Protein domains for ENSMUSP00000048520.7

Transcript-based displays