Description

germ cell-specific gene 1 [Source:MGI Symbol;Acc:MGI:1194499]

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 12 variations and maps to 21 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Gsg1-001ENSMUST000001119111426365aaENSMUSP00000107542
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS39683Q8R1W2 NM_010352
NP_034482
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Gsg1-004ENSMUST000001119101384365aaENSMUSP00000107541
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS39683Q8R1W2 NM_001080553
NP_001074022
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Gsg1-002ENSMUST000000877291304368aaENSMUSP00000085022
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS39682Q8R1W2 NM_001080552
NP_001074021
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI2APPRIS candidate principal isoform (CCDS)
Glossary entry for APPRIS
APPRIS website
Gsg1-003ENSMUST000001119091087324aaENSMUSP00000107540
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9QQ16 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website

Protein domains for ENSMUSP00000107542.2

Transcript-based displays