Description

epidermal growth factor [Source:MGI Symbol;Acc:MGI:95290]

About this transcript

This transcript has 24 exons, is annotated with 91 domains and features, is associated with 74 variations and maps to 42 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Egf-001ENSMUST0000002965347611217aaENSMUSP00000029653
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17833P01132 NM_010113
NP_034243
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Egf-007ENSMUST000001970793346716aaENSMUSP00000143075
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Egf-006ENSMUST000001996153211675aaENSMUSP00000142497
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Egf-004ENSMUST000001977134389254aaENSMUSP00000143108
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---
Egf-010ENSMUST00000198093798No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
Egf-005ENSMUST000001992722914No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
CCDS17829--
Egf-002ENSMUST000001988161662No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Egf-009ENSMUST00000197250667No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Egf-008ENSMUST00000199209478No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---

Protein domains for ENSMUSP00000029653.2

Transcript-based displays