Description

transient receptor potential cation channel, subfamily C, member 4 [Source:MGI Symbol;Acc:MGI:109525]

Location
About this transcript

This transcript has 11 exons, is annotated with 37 domains and features, is associated with 30 variations and maps to 27 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Trpc4-001ENSMUST000000293113473974aaENSMUSP00000029311
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17350Q0VB97 Q9QUQ5 NM_016984
NP_058680
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Trpc4-002ENSMUST000002000483170890aaENSMUSP00000143593
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--NM_001253682
NP_001240611
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Trpc4-006ENSMUST000002003413257400aaENSMUSP00000142921
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
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Trpc4-004ENSMUST000001984441380No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Trpc4-003ENSMUST000001993992977No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Trpc4-005ENSMUST000001993592790No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Protein domains for ENSMUSP00000029311.6

Transcript-based displays