Description

transgelin 2 [Source:MGI Symbol;Acc:MGI:1312985]

About this transcript

This transcript has 5 exons, is annotated with 24 domains and features, is associated with 5 variations and maps to 18 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Tagln2-001ENSMUST000001112301586199aaENSMUSP00000106861
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS35784Q9WVA4 NM_178598
NP_848713
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Tagln2-003ENSMUST00000111228716199aaENSMUSP00000106859
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS35784Q9WVA4 -TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Tagln2-004ENSMUST0000019246036990aaENSMUSP00000141983
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YXG6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Tagln2-002ENSMUST000001382961101No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Protein domains for ENSMUSP00000106861.1

Transcript-based displays