Description

glutamate receptor, ionotropic, kainate 1 [Source:MGI Symbol;Acc:MGI:95814]

Location
About this transcript

This transcript has 16 exons, is annotated with 26 domains and features, is associated with 26 variations and maps to 34 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Grik1-203ENSMUST000001141372894832aaENSMUSP00000109773
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q2Y1 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Grik1-202ENSMUST000000722562688895aaENSMUSP00000072107
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6QF13 NM_146072
NP_666184
TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Grik1-201ENSMUST000000236522601866aaENSMUSP00000023652
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6Z3M4 NM_010348
NP_034478
TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Protein domains for ENSMUSP00000072107.5

Transcript-based displays