Description

HNF1 homeobox B [Source:MGI Symbol;Acc:MGI:98505]

Location
About this transcript

This transcript has 9 exons, is annotated with 4 domains and features, is associated with 12 variations and maps to 29 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Hnf1b-001ENSMUST000000210162759558aaENSMUSP00000021016
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS25179P27889 NM_009330
NP_033356
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Hnf1b-002ENSMUST000001081142659532aaENSMUSP00000103749
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS70271P27889 NM_001291268
NP_001278197
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Hnf1b-003ENSMUST000001081132376435aaENSMUSP00000103748
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS70272P27889 NM_001291269
NP_001278198
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Hnf1b-005ENSMUST0000013597576357aaENSMUSP00000117036
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A0MQH4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Hnf1b-004ENSMUST00000146786671199aaENSMUSP00000123297
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6XBL0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Protein domains for ENSMUSP00000021016.2

Transcript-based displays