Description

ubiquitin specific peptidase 19 [Source:MGI Symbol;Acc:MGI:1918722]

About this transcript

This transcript has 27 exons, is annotated with 21 domains and features, is associated with 38 variations and maps to 48 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Usp19-001ENSMUST0000000685447911360aaENSMUSP00000006854
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS23529Q3UJD6 NM_027804
NP_082080
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI3APPRIS candidate principal isoform (earliest CCDS)
Glossary entry for APPRIS
APPRIS website
Usp19-002ENSMUST0000008504445201323aaENSMUSP00000082119
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS52924Q3UJD6 NM_001168372
NP_001161844
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Usp19-004ENSMUST0000017807545121324aaENSMUSP00000135930
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57702J3KMM1 NM_001168371
NP_001161843
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Usp19-003ENSMUST0000016610344731299aaENSMUSP00000128573
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS52925E9Q9M5 NM_145407
NP_663382
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Usp19-016ENSMUST0000019367845171322aaENSMUSP00000141738
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--NM_001168373
NP_001161845
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Usp19-017ENSMUST000001941713252991aaENSMUSP00000141628
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Usp19-014ENSMUST00000194863885295aaENSMUSP00000141826
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
Usp19-013ENSMUST00000193558384128aaENSMUSP00000142137
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
Usp19-015ENSMUST000001939751548No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Usp19-009ENSMUST000001928541352No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Usp19-010ENSMUST00000194499803No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Usp19-007ENSMUST00000193412753No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Usp19-006ENSMUST00000195763744No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Usp19-011ENSMUST00000193571729No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Usp19-012ENSMUST00000194225607No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Usp19-018ENSMUST00000193183525No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Protein domains for ENSMUSP00000006854.7

Transcript-based displays