Gene: Ndst2 ENSMUSG00000039308

Description

N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 [Source:MGI Symbol;Acc:MGI:97040]

Gene Synonyms

Mndns, [Heparan sulfate]-glucosamine N-sulfotransferase, glucosaminyl N-deacetylase/N-sulphotransferase-2

Location

Chromosome 14: 20,773,798-20,784,630 reverse strand.

GRCm39:CM001007.3

About this gene

This gene has 7 transcripts (splice variants), 219 orthologues, 10 paralogues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000223679.2	Ndst2-202	3907	883aa	ENSMUSP00000153036.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26854	P52850	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000225000.2	Ndst2-205	3661	883aa	ENSMUSP00000153141.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26854	P52850	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000047490.6	Ndst2-201	3305	883aa	ENSMUSP00000040227.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26854	P52850	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000224829.2	Ndst2-204	1147	198aa	ENSMUSP00000153393.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YDF1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000225419.2	Ndst2-207	3137	513aa	ENSMUSP00000153275.2	Nonsense mediated decay		Q2TBA8	-
ENSMUST00000224234.2	Ndst2-203	678	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000225320.2	Ndst2-206	291	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Gene: Ndst2 ENSMUSG00000039308

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Gene: Ndst2 ENSMUSG00000039308

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