Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Vmn2r9 ENSMUSG00000091624

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Description

vomeronasal 2, receptor 9 [Source:MGI Symbol;Acc:MGI:3643093]

Gene Synonyms

EG435864

Location

Chromosome 5: 108,983,139-109,000,467 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 4 transcripts (splice variants), 109 orthologues and 128 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000170419.3	Vmn2r9-201	10299	848aa	ENSMUSP00000129520.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51595	K7N6Z8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000233835.2	Vmn2r9-204	10236	827aa	ENSMUSP00000156817.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2W817	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000233198.2	Vmn2r9-202	7902	848aa	ENSMUSP00000156678.2	Nonsense mediated decay	CCDS51595	K7N6Z8	-
ENSMUST00000233547.2	Vmn2r9-203	7839	827aa	ENSMUSP00000156745.2	Nonsense mediated decay		A0A3B2W817	-

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Summary

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