Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Slc35f3 ENSMUSG00000057060

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Description

solute carrier family 35, member F3 [Source:MGI Symbol;Acc:MGI:2444426]

Gene Synonyms

B230375D17Rik

Location

Chromosome 8: 126,865,734-127,122,717 forward strand.

GRCm39:CM001001.3

About this gene

This gene has 3 transcripts (splice variants), 211 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000238518.2	Slc35f3-203	2912	490aa	ENSMUSP00000158727.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A571BEK8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000238386.2	Slc35f3-202	2531	327aa	ENSMUSP00000158619.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A571BFY6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000108759.3	Slc35f3-201	2309	421aa	ENSMUSP00000104390.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40520	Q1LZI2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

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Summary

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