Gene: Tnni3k ENSMUSG00000040086

Description

TNNI3 interacting kinase [Source:MGI Symbol;Acc:MGI:2443276]

Gene Synonyms

Cark, D830019J24Rik

Location

Chromosome 3: 154,491,928-154,761,044 reverse strand.

GRCm39:CM000996.3

About this gene

This gene has 3 transcripts (splice variants), 188 orthologues, 23 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000064076.6	Tnni3k-201	3034	834aa	ENSMUSP00000070561.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS17928	Q5GIG6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000143410.7	Tnni3k-202	2762	675aa	ENSMUSP00000122478.2	Nonsense mediated decay		Q5GIG6-2	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000146952.2	Tnni3k-203	738	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Gene: Tnni3k ENSMUSG00000040086

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Gene: Tnni3k ENSMUSG00000040086

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