Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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ID History
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Gene: Ankrd53 ENSMUSG00000014747

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Description

ankyrin repeat domain 53 [Source:MGI Symbol;Acc:MGI:1922555]

Gene Synonyms

4930564N15Rik

Location

Chromosome 6: 83,739,626-83,745,308 forward strand.

GRCm39:CM000999.3

About this gene

This gene has 2 transcripts (splice variants) and 141 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000014891.5	Ankrd53-201	1739	497aa	ENSMUSP00000014891.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20284	Q3V0J4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000206496.2	Ankrd53-202	1243	354aa	ENSMUSP00000145973.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9CUG5	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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