Description

alanine-glyoxylate aminotransferase 2 [Source:MGI Symbol;Acc:MGI:2146052]

Location
INSDC coordinates

chromosome:GRCm38:CM001008.2:10358532:10410153:1

About this gene

This gene has 4 transcripts (splice variants), 72 orthologues, 2 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Agxt2-201ENSMUST000000228581825541aaENSMUSP00000022858
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS27378H7BWY3 NM_001031851
NP_001027021
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Agxt2-001ENSMUST000001105422198513aaENSMUSP00000106171
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q3UEG6 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Agxt2-002ENSMUST000001105411222234aaENSMUSP00000106170
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YZ49 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Agxt2-003ENSMUST00000110540812122aaENSMUSP00000106169
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YZ52 -TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays