Description

brachyury [Source:MGI Symbol;Acc:MGI:98472]

Location
INSDC coordinates

chromosome:GRCm38:CM001010.2:8434423:8442496:1

About this gene

This gene has 3 transcripts (splice variants), 51 orthologues, 12 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
T-001ENSMUST000000746672046436aaENSMUSP00000074236
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS28383P20293 Q78ZW9 NM_009309
NP_033335
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

T-003ENSMUST00000177118761254aaENSMUSP00000135526
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BKU2 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

T-002ENSMUST00000136922681137aaENSMUSP00000119581
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z1X4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays