Description

gap junction protein, alpha 5 [Source:MGI Symbol;Acc:MGI:95716]

Location
INSDC coordinates

chromosome:GRCm38:CM000996.2:96904693:97077416:1

About this gene

This gene has 3 transcripts (splice variants), 60 orthologues, 10 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Gja5-001ENSMUST000000726003109358aaENSMUSP00000088264
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17652Q01231 NM_001271628
NM_008121
NP_001258557
NP_032147
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gja5-003ENSMUST000001995973668368aaENSMUSP00000143542
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q8CAG8 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Gja5-002ENSMUST0000013225640581aaENSMUSP00000123582
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q6TPI9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays