Description

phosphatidylinositol transfer protein, beta [Source:MGI Symbol;Acc:MGI:1927542]

INSDC coordinates

chromosome:GRCm38:CM000998.2:111330763:111388359:1

About this gene

This gene has 4 transcripts (splice variants), 68 orthologues, 5 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Pitpnb-001ENSMUST000000866352761271aaENSMUSP00000083835
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS39213P53811 NM_001301644
NM_019640
NP_001288573
NP_062614
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P2

PRINCIPAL2 - APPRIS candidate principal isoform (CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Pitpnb-002ENSMUST000002002982632272aaENSMUSP00000142732
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q8JZZ5 NM_001301643
NP_001288572
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1

ALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Pitpnb-003ENSMUST00000196192485No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Pitpnb-004ENSMUST00000198137850No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays