Gene: Efna5 ENSMUSG00000048915

Description

ephrin A5 [Source:MGI Symbol;Acc:MGI:107444]

Gene Synonyms

AL-1, EFL-5, Ephrin-A5, Epl7, LERK-7, RAGS

Location

Chromosome 17: 62,911,179-63,188,312 reverse strand.

GRCm39:CM001010.3

About this gene

This gene has 2 transcripts (splice variants), 287 orthologues, 7 paralogues and is associated with 45 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000076840.12	Efna5-201	4032	228aa	ENSMUSP00000076115.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28935	O08543	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000078839.5	Efna5-202	643	201aa	ENSMUSP00000077883.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28934	O08543-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Gene: Efna5 ENSMUSG00000048915

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Gene: Efna5 ENSMUSG00000048915

Summary

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