Description

sine oculis-related homeobox 3 [Source:MGI Symbol;Acc:MGI:102764]

Location
INSDC coordinates

chromosome:GRCm38:CM001010.2:85613608:85629302:1

About this gene

This gene has 3 transcripts (splice variants), 40 orthologues, 5 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Six3-001ENSMUST000001760813680333aaENSMUSP00000135312
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50203Q62233 NM_011381
NP_035511
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Six3-002ENSMUST000001758982419333aaENSMUSP00000135677
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50203Q62233 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Six3-004ENSMUST000001626952838347aaENSMUSP00000125169
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q52KB8 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays